Synthesis and activity evaluation of new second-generation santacruzamate a analogs against breast cancer cells

Authors

  • Samira Fagundes de Andrade Departamento de Química (DEQUI), Instituto de Ciências Exatas e Biológicas (ICEB), Universidade Federal de Ouro Preto, Campus Universitário Morro do Cruzeiro, Ouro Preto, MG, Brazil , Federal University of Ouro Preto image/svg+xml
  • Fernanda Cristina Gontijo Evangelista Departamento de Análises Clínicas e Toxicológicas, Faculdade de Farmácia, Universidade Federal de Minas Gerais, Campus Pampulha, Belo Horizonte, MG, Brazil , Federal University of Minas Gerais image/svg+xml
  • Silmara Nunes Andrade Núcleo de Pesquisa em Química Biológica (NQBio), Universidade Federal de São João del-Rei, Campus Centro Oeste, Divinópolis, MG, Brazil , Federal University of São João del-Rei image/svg+xml
  • Caique Lopes Duarte Núcleo de Pesquisa em Química Biológica (NQBio), Universidade Federal de São João del-Rei, Campus Centro Oeste, Divinópolis, MG, Brazil , Federal University of São João del-Rei image/svg+xml
  • Hélio Batista dos Santos Laboratório de Processamento de Tecido, Universidade Federal de São João del-Rei, Campus Centro Oeste, Divinópolis, MG, Brazil , Federal University of São João del-Rei image/svg+xml
  • Ralph Gruppi Thomé Laboratório de Processamento de Tecido, Universidade Federal de São João del-Rei, Campus Centro Oeste, Divinópolis, MG, Brazil , Federal University of São João del-Rei image/svg+xml
  • Jorge Luiz Humberto Departamento de Química (DEQUI), Instituto de Ciências Exatas e Biológicas (ICEB), Universidade Federal de Ouro Preto, Campus Universitário Morro do Cruzeiro, Ouro Preto, MG, Brazil , Federal University of Ouro Preto image/svg+xml
  • Rossimiriam Pereira de Freitas Departamento de Química, Instituto de Ciências Exatas, Universidade Federal de Minas Gerais, Campus Pampulha, Belo Horizonte, MG, Brazil , Federal University of Minas Gerais image/svg+xml
  • Adriano de Paula Sabino Departamento de Análises Clínicas e Toxicológicas, Faculdade de Farmácia, Universidade Federal de Minas Gerais, Campus Pampulha, Belo Horizonte, MG, Brazil , Federal University of Minas Gerais image/svg+xml
  • Flaviane Francisco Hilário Departamento de Química (DEQUI), Instituto de Ciências Exatas e Biológicas (ICEB), Universidade Federal de Ouro Preto, Campus Universitário Morro do Cruzeiro, Ouro Preto, MG, Brazil , Federal University of Ouro Preto image/svg+xml
  • Fernando de Pilla Varotti Núcleo de Pesquisa em Química Biológica (NQBio), Universidade Federal de São João del-Rei, Campus Centro Oeste, Divinópolis, MG, Brazil , Federal University of São João del-Rei image/svg+xml
  • Túlio Resende Freitas Núcleo de Pesquisa em Química Biológica (NQBio), Universidade Federal de São João del-Rei, Campus Centro Oeste, Divinópolis, MG, Brazil , Federal University of São João del-Rei image/svg+xml https://orcid.org/0000-0002-2289-2201

DOI:

https://doi.org/10.1590/s2175-97902025e24545

Keywords:

Synthesis, Santacruzamate A analogs, HDACi, Apoptosis, Cytotoxic activity

Abstract

A series of second-generation compounds analogous to Santacruzamate A were designed, synthesized, and evaluated for their selective cytotoxic activity against the breast cancer cell line MDA-MB-231 (ATCC HTB-26). Compound 7 demonstrated the highest cytotoxicity and selectivity among the tested compounds, with an IC50 value of 8.30 μM, comparable to those of the positive controls cisplatin (8.46 μM) and etoposide (12 μM). In silico studies identified histone deacetylase 8 (HDAC8) as a potential target of compound 7, supporting its role as an HDAC inhibitor. Experimental data further confirmed the pro-apoptotic activity of compound 7, as it significantly increased caspase-3 and caspase-9 activities, along with TP53 and BAK expression compared to the untreated group. These findings indicate that compound 7 induces apoptotic cell death in tumor cells through the intrinsic mitochondrial pathway. This study highlights compound 7 as a promising candidate for further exploration as a selective anticancer agent targeting breast cancer cells.

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References

Al-Oudat BA, Alqudah MA, Audat SA, Al-Balas QA, El-Elimat T, Hassan MA, et al. Design, synthesis, and biologic evaluation of novel chrysin derivatives as cytotoxic agents and caspase-3/7 activators. Drug Des Devel Ther. 2019;13:423–33. https://doi.org/10.2147/dddt.s189476.

Andrade SN, Evangelista FCG, Seckler D, Marques DR, Freitas TR, Nunes RR, et al. Synthesis, cytotoxic activity, and mode of action of new Santacruzamate A analogs. Med Chem Res. 2018;27:2397–413. https://doi.org/10.1007/s00044-018-2244-3.

Berman HM, Kleywegt GJ, Nakamura H, Markley JL. The future of the protein data bank. Biopolymers. 2013;99:218–22. https://doi.org/10.1002/bip.22132.

Bianchini G, De Angelis C, Licata L, Gianni L. Treatment landscape of triple-negative breast cancer — expanded options, evolving needs. Nat Rev Clin Oncol. 2022;19:91–113. https://doi.org/10.1038/s41571-021-00565-2.

Bou Zerdan M, Ghorayeb T, Saliba F, Allam S, Bou Zerdan M, Yaghi M, et al. Triple negative breast cancer: Updates on classification and treatment in 2021. Cancers (Basel). 2022;14. https://doi.org/10.3390/cancers14051253.

Bukowski K, Kciuk M, Kontek R. Mechanisms of multidrug resistance in cancer chemotherapy. Int J Mol Sci. 2020;21.

Carregal AP, Maciel F V, Carregal JB, dos Reis Santos B, da Silva AM, Taranto AG. Docking-based virtual screening of Brazilian natural compounds using the OOMT as the pharmacological target database. J Mol Model. 2017;23. https://doi.org/10.1007/s00894-017-3253-8.

Chen C, Lu L, Yan S, Yi H, Yao H, Wu D, et al. Autophagy and Doxorubicin resistance in cancer. Anticancer Drugs 2018;29:1–9. https://doi.org/10.1097/CAD.0000000000000572.

Chen PC, Patil V, Guerrant W, Green P, Oyelere AK. Synthesis and structure – activity relationship of histone deacetylase (HDAC) inhibitors with triazole-linked cap group. Bioorg Med Chem. 2008;16:4839–53. https://doi.org/10.1016/j.bmc.2008.03.050.

Chen Y, Lopez-Sanchez M, Savoy DN, Billadeau DD, Dow GS, Kozikowski AP. A series of potent and selective, triazolylphenyl-based histone deacetylases inhibitors with activity against pancreatic cancer cells and Plasmodium falciparum. J Med Chem. 2008;51:3437–48. https://doi.org/10.1021/jm701606b.

Corrie PG. Cytotoxic chemotherapy: Clinical aspects. Medicine. 2011;39:717–22. https://doi.org/10.1016/j.mpmed.2011.09.012.

Day JA, Cohen SM. Investigating the selectivity of metalloenzyme inhibitors. J Med Chem. 2013;56(20):7997-8007. doi: 10.1021/jm401053m.

Fierz B, Muir TW. Chromatin as an expansive canvas for chemical biology. Nat Chem Biol. 2014;8:417–27. https://doi.org/10.1038/nchembio.938.

Gromek SM, deMayo JA, Maxwell AT, West AM, Pavlik CM, Zhao Z, et al. Synthesis and biological evaluation of santacruzamate A analogues for anti-proliferative and immunomodulatory activity. Bioorg Med Chem. 2016;24:5183–96. https://doi.org/10.1016/j.bmc.2016.08.040.

Guadagni A, Barone S, Alfano AI, Pelliccia S, Bello I, Panza E, et al. Tackling triple negative breast cancer with HDAC inhibitors: 6 is the isoform! Eur J Med Chem. 2024;279. https://doi.org/10.1016/j.ejmech.2024.116884.

Hospital A, Goñi JR, Orozco M, Gelpí JL. Molecular dynamics simulations: Advances and applications. Adv Appl Bioinform Chem. 2015;8:37–47. https://doi.org/10.2147/AABC.S70333.

Kaur M, Kohli S, Sandhu S, Bansal Y, Bansal G. Coumarin: A Promising Scaffold for Anticancer Agents. Anticancer Agents Med Chem. 2015;15:1032–48. https://doi.org/10.2174/1871520615666150101125503.

von Knethen A, Brüne B. Histone Deacetylation Inhibitors as Therapy Concept in Sepsis. Int J Mol Sci. 2019;20:346. https://doi.org/10.3390/ijms20020346.

Koopman BG, Reutelingsperger CPM, Kuijten GAM, Keehnen RMJ, Pals ST, van Oers MHJ. Annexin V for flow cytometric detection of phosphatidylserine expression on B cells Undergoing apoptosis. Blood. 1994;84(5):1415-20.

Li P, Zhou L, Zhao T, Liu X, Zhang P, Zheng X, et al. Caspase-9: structure, mechanisms and clinical application. Oncotarget. 2017;8:23996–4008. https://doi.org/10.18632/oncotarget.15098.

Lin CL, Tsai ML, Lin CY, Hsu KW, Hsieh WS, Chi WM, et al. HDAC1 and HDAC2 double knockout triggers cell apoptosis in advanced thyroid cancer. Int J Mol Sci. 2019;20. https://doi.org/10.3390/ijms20020454.

Maia EHB, Campos VA, dos Reis Santos B, Costa MS, Lima IG, Greco SJ, et al. Octopus: a platform for the virtual high-throughput screening of a pool of compounds against a set of molecular targets. J Mol Model. 2017;23. https://doi.org/10.1007/s00894-016-3184-9.

Manal M, Chandrasekar MJN, Gomathi Priya J, Nanjan MJ. Inhibitors of histone deacetylase as antitumor agents: A critical review. Bioorg Chem. 2016;67:18–42. https://doi.org/10.1016/j.bioorg.2016.05.005.

McIlwain DR, Berger T, Mak TW. Caspase functions in cell death and disease. Cold Spring Harb Perspect Biol. 2013;5:1–28. https://doi.org/10.1101/cshperspect.a008656.

Mehmood SA, Sahu KK, Sengupta S, Partap S, Karpoormath R, Kumar B, et al. Recent advancement of HDAC inhibitors against breast cancer. Med Oncol. 2023;40. https://doi.org/10.1007/s12032-023-02058-x.

Mollazadeh H, Afshari AR, Hosseinzadeh H. Review on the potential therapeutic roles of Nigella sativa in the treatment of patients with cancer: Involvement of apoptosis: - Black cumin and cancer. J Pharmacopuncture. 2017;20:158–72. https://doi.org/10.3831/KPI.2017.20.019.

Mottamal M, Zheng S, Huang TL, Wang G. Histone deacetylase inhibitors in clinical studies as templates for new anticancer agents. Molecules. 2015;20:3898–941. https://doi.org/10.3390/molecules20033898.

Obidiro O, Battogtokh G, Akala EO. Triple negative breast cancer treatment options and limitations: Future outlook. Pharmaceutics. 2023;15. https://doi.org/10.3390/pharmaceutics15071796.

Ong PS, Wang XQ, Lin HS, Chan SY, Ho PC. Synergistic effects of suberoylanilide hydroxamic acid combined with cisplatin causing cell cycle arrest independent apoptosis in platinum-resistant ovarian cancer cells. Int J Oncol. 2012;40:1705–13. https://doi.org/10.3892/ijo.2012.1354.

Otto T, Sicinski P. Cell cycle proteins as promising targets in cancer therapy. Nat Rev Cancer. 2017;17:93–115. https://doi.org/10.1038/nrc.2016.138.

Pavlik CM, Wong CYB, Ononye S, Lopez DD, Engene N, McPhail KL, et al. Santacruzamate A, a potent and selective histone deacetylase inhibitor from the panamanian marine cyanobacterium cf. symploca sp. J Nat Prod. 2013;76:2026–33. https://doi.org/10.1021/np400198r.

Popolin CP, Reis JPB, Becceneri AB, Graminha AE, Almeida MAP, Corrêa RS, et al. Cytotoxicity and anti-tumor effects of new ruthenium complexes on triple negative breast cancer cells. PLoS One. 2017;12:1–21. https://doi.org/10.1371/journal.pone.0183275.

Ramaiah MJ, Tangutur AD, Manyam RR. Epigenetic modulation and understanding of HDAC inhibitors in cancer therapy. Life Sci. 2021;277. https://doi.org/10.1016/j.lfs.2021.119504.

Randino R, Gazzerro P, Mazitschek R, Rodriquez M. Synthesis and biological evaluation of Santacruzamate-A based analogues. Bioorg Med Chem. 2017;25:6486–91. https://doi.org/10.1016/j.bmc.2017.10.026.

Richon VM. Cancer biology: mechanism of antitumour action of vorinostat (suberoylanilide hydroxamic acid), a novel histone deacetylase inhibitor. Br J Cancer. 2006;95(S1):S2–6. https://doi.org/10.1038/sj.bjc.6603463

Sandhu S, Bansal Y, Silakari O, Bansal G. Coumarin hybrids as novel therapeutic agents. Bioorg Med Chem. 2014;22:3806–14. https://doi.org/10.1016/j.bmc.2014.05.032.

Schizas D, Mastoraki A, Naar L, Spartalis E, Tsilimigras DI, Karachaliou G-S, et al. Concept of histone deacetylases in cancer: Reflections on esophageal carcinogenesis and treatment. World J Gastroenterol. 2018;24:4635–42. https://doi.org/10.3748/wjg.v24.i41.4635.

Shanmugam G, Rakshit S, Sarkar K. HDAC inhibitors: Targets for tumor therapy, immune modulation and lung diseases. Transl Oncol. 2022;16. https://doi.org/10.1016/j.tranon.2021.101312.

Stewart JJP. MOPAC2016TM 2016. http://openmopac.net/MOPAC2016.html.

Sung H, Ferlay J, Siegel RL, Laversanne M, Soerjomataram I, Jemal A, et al. Global Cancer Statistics 2020: GLOBOCAN Estimates of Incidence and Mortality Worldwide for 36 Cancers in 185 Countries. CA Cancer J Clin. 2021;71:209–49. https://doi.org/10.3322/caac.21660.

Traoré M, Mietton F, Maubon D, Peuchmaur M, Francisco Hilário F, Pereira De Freitas R, et al. Flexible synthesis and evaluation of diverse anti-apicomplexa cyclic peptides. J Org Chem. 2013;78:3655–75. https://doi.org/10.1021/jo4001492.

Trott O, Olson A. NIH Public Access. J Comput Chem. 2010;31:455–61. https://doi.org/10.1002/jcc.21334. AutoDock.

Venkatesh S, Workman JL. Histone exchange, chromatin structure and the regulation of transcription. Nat Rev Mol Cell Biol. 2015;16:178–89. https://doi.org/10.1038/nrm3941.

Vidal SJ, Rodriguez-Bravo V, Galsky M, Cordon-Cardo C, Domingo-Domenech J. Targeting cancer stem cells to suppress acquired chemotherapy resistance. Oncogene. 2014;33:4451–63. https://doi.org/10.1038/onc.2013.411.

Volkmann N, Marassi FM, Newmeyer DD, Hanein D. The rheostat in the membrane: BCL-2 family proteins and apoptosis. Cell Death Differ. 2014;21:206–15. https://doi.org/10.1038/cdd.2013.153.

World Health Organization (WHO). Global Health Estimates 2020: Deaths by Cause, Age, Sex, by Country and by Region, 2000-2019 2020. who.int/data/gho/data/themes/mortality-and-global-health-estimates/ghe-leading-causes-of-death (accessed January 16, 2023).

Yin L, Duan JJ, Bian XW, Yu SC. Triple-negative breast cancer molecular subtyping and treatment progress. Breast Cancer Res. 2020;22. https://doi.org/10.1186/s13058-020-01296-5.

Zhang J, Zhong Q. Histone deacetylase inhibitors and cell death. Cell Mol Life Sci. 2014;71:3885–901. https://doi.org/10.1007/s00018-014-1656-6.

Zhang P, Chen J, Liang Y. DNA binding, cytotoxicity, and apoptotic-inducing activity of ruthenium(II) polypyridyl complex. Acta Biochim Biophys Sin. 2010;42:440–9. https://doi.org/10.1093/abbs/gmq040. Advance.

Zhou H, Cai Y, Liu D, Li M, Sha Y, Zhang W, et al. Pharmacological or transcriptional inhibition of both HDAC1 and 2 leads to cell cycle blockage and apoptosis via p21 Waf1/Cip1 and p19 INK4d upregulation in hepatocellular carcinoma. Cell Prolif. 2018;51:e12447. https://doi.org/10.1111/cpr.12447

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Published

2025-11-10

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How to Cite

Synthesis and activity evaluation of new second-generation santacruzamate a analogs against breast cancer cells. (2025). Brazilian Journal of Pharmaceutical Sciences, 61, e24545. https://doi.org/10.1590/s2175-97902025e24545